The problem I'm having is that MySQL (5.5.46-0+deb7u1) is not generating log files. This on Debian Wheezy.
The my.cfg file has been updated according to the required config for logging ALL queries (as per http://www.microhowto.info/howto/log_all_queries_to_a_mysql_server.html). It's not writing to the specified location, nor to the default location.
Mysql errors are also not being logged, as far as I can tell.
EDIT: my.cnf is here: http://pastie.org/private/q9vwgihslpenc94mxmyyiw
EDIT: Here's the output of "show variables like '%warn%';":
+---------------+-------+
| Variable_name | Value |
+---------------+-------+
| log_warnings | 1 |
| sql_warnings | OFF |
| warning_count | 0 |
+---------------+-------+