Given the various simplifying assumptions given in the comments (Dates only and no overlapping intervals within a table) I might be minded to keep things simple.
First create an auxiliary numbers table (zero based)
CREATE TABLE dbo.SmallNumbers
(
Number SMALLINT PRIMARY KEY
)
INSERT INTO dbo.SmallNumbers
SELECT TOP 32768 ROW_NUMBER() OVER (ORDER BY @@SPID)-1 AS Number
FROM sys.all_columns c1, sys.all_columns c2
Then the code below expands out the ranges to their component dates, uses EXCEPT
to find the difference and a gaps and islands technique to collapse the ranges back down. As each date will only be represented once we are likely only talking about expanding out to a few thousand dates per decade covered.
WITH UnmatchedDates(Date) AS
(
SELECT DATEADD(DAY,N.Number, StartTs)
FROM Table1
JOIN dbo.SmallNumbers N ON N.Number <= DATEDIFF(DAY, StartTs, EndTs)
EXCEPT
SELECT DATEADD(DAY,N.Number, StartTs)
FROM Table2
JOIN dbo.SmallNumbers N ON N.Number <= DATEDIFF(DAY, StartTs, EndTs)
),
UnmatchedDatesWithPrev(Date, Grp) AS
(
SELECT Date,
DATEDIFF(DAY, 0, Date) - ROW_NUMBER() OVER (ORDER BY Date)
FROM UnmatchedDates
)
SELECT StartTs = MIN(Date),
EndTs = MAX(Date)
FROM UnmatchedDatesWithPrev
GROUP BY Grp